Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GSC2O15499 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.66■□□□□ 0.9
GSC2O15499 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.66■□□□□ 0.9
GSC2O15499 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 OXCT2P1-201ENST00000447263 1535 ntBASIC20.66■□□□□ 0.9
GSC2O15499 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.66■□□□□ 0.9
GSC2O15499 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.66■□□□□ 0.9
GSC2O15499 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GSC2O15499 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GSC2O15499 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GSC2O15499 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 GABARAPL3-202ENST00000624044 1851 ntBASIC20.65■□□□□ 0.9
GSC2O15499 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GSC2O15499 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GSC2O15499 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.65■□□□□ 0.9
GSC2O15499 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GSC2O15499 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GSC2O15499 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
GSC2O15499 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GSC2O15499 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GSC2O15499 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GSC2O15499 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.64■□□□□ 0.89
GSC2O15499 DUX4L9-201ENST00000449051 1259 ntBASIC20.64■□□□□ 0.89
GSC2O15499 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 AFG3L1P-217ENST00000557444 2447 ntBASIC20.64■□□□□ 0.89
GSC2O15499 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GSC2O15499 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GSC2O15499 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GSC2O15499 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
GSC2O15499 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GSC2O15499 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GSC2O15499 AC022616.5-201ENST00000518796 181 ntBASIC20.63■□□□□ 0.89
GSC2O15499 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GSC2O15499 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
GSC2O15499 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.63■□□□□ 0.89
GSC2O15499 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
GSC2O15499 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GSC2O15499 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.63■□□□□ 0.89
GSC2O15499 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
GSC2O15499 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.62■□□□□ 0.89
GSC2O15499 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GSC2O15499 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GSC2O15499 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 AC104564.3-201ENST00000582367 638 ntBASIC20.61■□□□□ 0.89
GSC2O15499 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.61■□□□□ 0.89
GSC2O15499 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.61■□□□□ 0.89
GSC2O15499 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GSC2O15499 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GSC2O15499 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GSC2O15499 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.6■□□□□ 0.89
GSC2O15499 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 AL049796.1-201ENST00000565336 1766 ntBASIC20.6■□□□□ 0.89
GSC2O15499 AP005212.1-201ENST00000581547 1997 ntBASIC20.6■□□□□ 0.89
GSC2O15499 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 GPX1-201ENST00000419349 1106 ntBASIC20.6■□□□□ 0.89
GSC2O15499 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.6■□□□□ 0.89
GSC2O15499 DUX4L4-201ENST00000566884 1269 ntBASIC20.6■□□□□ 0.89
GSC2O15499 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GSC2O15499 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
GSC2O15499 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GSC2O15499 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms