Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PPM1DO15297 AC080038.1-201ENST00000611274 1154 ntBASIC20.92■□□□□ 0.94
PPM1DO15297 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
PPM1DO15297 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPM1DO15297 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PPM1DO15297 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.91■□□□□ 0.94
PPM1DO15297 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.91■□□□□ 0.94
PPM1DO15297 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PPM1DO15297 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.91■□□□□ 0.94
PPM1DO15297 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PPM1DO15297 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PPM1DO15297 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPM1DO15297 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 AC233723.2-201ENST00000623798 2106 ntBASIC20.9■□□□□ 0.94
PPM1DO15297 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.9■□□□□ 0.94
PPM1DO15297 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
PPM1DO15297 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.9■□□□□ 0.94
PPM1DO15297 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.9■□□□□ 0.94
PPM1DO15297 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPM1DO15297 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PPM1DO15297 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.9■□□□□ 0.94
PPM1DO15297 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PPM1DO15297 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.94
PPM1DO15297 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPM1DO15297 ESRRAP2-201ENST00000418437 1549 ntBASIC20.89■□□□□ 0.94
PPM1DO15297 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPM1DO15297 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.89■□□□□ 0.93
PPM1DO15297 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.89■□□□□ 0.93
PPM1DO15297 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 AC012676.1-201ENST00000574705 1949 ntBASIC20.89■□□□□ 0.93
PPM1DO15297 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
PPM1DO15297 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.89■□□□□ 0.93
PPM1DO15297 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.89■□□□□ 0.93
PPM1DO15297 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPM1DO15297 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PPM1DO15297 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PPM1DO15297 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPM1DO15297 OR7E47P-201ENST00000546390 1422 ntBASIC20.88■□□□□ 0.93
PPM1DO15297 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
PPM1DO15297 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.88■□□□□ 0.93
PPM1DO15297 AC055733.4-201ENST00000638462 1354 ntBASIC20.88■□□□□ 0.93
PPM1DO15297 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPM1DO15297 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.88■□□□□ 0.93
PPM1DO15297 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPM1DO15297 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPM1DO15297 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.88■□□□□ 0.93
PPM1DO15297 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.88■□□□□ 0.93
PPM1DO15297 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PPM1DO15297 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPM1DO15297 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.87■□□□□ 0.93
PPM1DO15297 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.87■□□□□ 0.93
PPM1DO15297 CDCA4P2-201ENST00000441182 718 ntBASIC20.87■□□□□ 0.93
PPM1DO15297 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.87■□□□□ 0.93
PPM1DO15297 AC104187.1-201ENST00000607510 612 ntBASIC20.87■□□□□ 0.93
PPM1DO15297 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.87■□□□□ 0.93
PPM1DO15297 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.87■□□□□ 0.93
PPM1DO15297 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPM1DO15297 KRT87P-202ENST00000534226 1464 ntBASIC20.87■□□□□ 0.93
PPM1DO15297 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PPM1DO15297 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 RAP2CP1-201ENST00000605103 478 ntBASIC20.86■□□□□ 0.93
PPM1DO15297 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPM1DO15297 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PPM1DO15297 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPM1DO15297 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPM1DO15297 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PPM1DO15297 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms