Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.95■□□□□ 0.3
RBFOX3A6NFN3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RBFOX3A6NFN3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RBFOX3A6NFN3 AFG3L1P-217ENST00000557444 2447 ntBASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RBFOX3A6NFN3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 GABARAPL3-202ENST00000624044 1851 ntBASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 AC026202.3-201ENST00000600805 1127 ntBASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RBFOX3A6NFN3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 AC092296.2-201ENST00000589470 999 ntBASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RBFOX3A6NFN3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.89■□□□□ 0.3
RBFOX3A6NFN3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RBFOX3A6NFN3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms