Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
TMEM235A6NFC5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 AC021242.3-201ENST00000607598 1377 ntBASIC18.29■□□□□ 0.52
TMEM235A6NFC5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM235A6NFC5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM235A6NFC5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 AL031848.2-201ENST00000607670 837 ntBASIC18.27■□□□□ 0.52
TMEM235A6NFC5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM235A6NFC5 LINC01521-201ENST00000504184 1943 ntBASIC18.27■□□□□ 0.51
TMEM235A6NFC5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM235A6NFC5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.27■□□□□ 0.51
TMEM235A6NFC5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.26■□□□□ 0.51
TMEM235A6NFC5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 C17orf82-201ENST00000623772 1530 ntBASIC18.26■□□□□ 0.51
TMEM235A6NFC5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM235A6NFC5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM235A6NFC5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM235A6NFC5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms