Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM49BA6NDI0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM49BA6NDI0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
TRIM49BA6NDI0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 UNC93B3-201ENST00000308076 687 ntBASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
TRIM49BA6NDI0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 Z98882.1-201ENST00000622160 2253 ntBASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 MIR4767-201ENST00000582827 78 ntBASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49BA6NDI0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM49BA6NDI0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM49BA6NDI0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 AF106564.1-201ENST00000607058 2553 ntBASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 AP005435.1-201ENST00000529293 1178 ntBASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 AC024257.2-201ENST00000549699 147 ntBASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49BA6NDI0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM49BA6NDI0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM49BA6NDI0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM49BA6NDI0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM49BA6NDI0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49BA6NDI0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM49BA6NDI0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms