Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.51■□□□□ 0.39
DUXBA0A1W2PPF3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 HSD17B1P1-201ENST00000590052 955 ntBASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 AL499627.2-201ENST00000606283 725 ntBASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 AC009102.2-201ENST00000606772 1639 ntBASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.5■□□□□ 0.39
DUXBA0A1W2PPF3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.49■□□□□ 0.39
DUXBA0A1W2PPF3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 AC004987.1-201ENST00000428627 508 ntBASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 AL157384.1-201ENST00000445995 2473 ntBASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUXBA0A1W2PPF3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 AL031602.1-201ENST00000633169 911 ntBASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 OR7E47P-201ENST00000546390 1422 ntBASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DUXBA0A1W2PPF3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.46■□□□□ 0.39
DUXBA0A1W2PPF3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
DUXBA0A1W2PPF3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms