Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SLC25A24-204ENST00000569674 2357 ntBASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV4-1A0A0J9YWV2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AC099791.2-201ENST00000605725 427 ntBASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV4-1A0A0J9YWV2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AC073130.3-201ENST00000624389 2278 ntBASIC19.64■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms