Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL031602.1-201ENST00000633169 911 ntBASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRBV6-7A0A0A0MS04 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 UNC93B8-201ENST00000511903 705 ntBASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 AL451085.2-201ENST00000605085 799 ntBASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-7A0A0A0MS04 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-7A0A0A0MS04 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC133637.1-201ENST00000624115 1537 ntBASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-7A0A0A0MS04 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV6-7A0A0A0MS04 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC079089.2-201ENST00000531211 1277 ntBASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC007952.6-201ENST00000573168 2673 ntBASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 AC003957.1-201ENST00000625108 2673 ntBASIC17.91■□□□□ 0.46
TRBV6-7A0A0A0MS04 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 RNF165-205ENST00000588679 2904 ntBASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 FEM1AP4-201ENST00000443167 1987 ntBASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV6-7A0A0A0MS04 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms