Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 MIR3181-201ENST00000578512 73 ntBASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV30A0A087WSZ9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 AL138724.1-201ENST00000606771 1088 ntBASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV30A0A087WSZ9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 AC010542.4-201ENST00000563151 1910 ntBASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 FAM99A-202ENST00000538190 1989 ntBASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 AC244015.2-201ENST00000616358 1861 ntBASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV30A0A087WSZ9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV30A0A087WSZ9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 AC010141.3-201ENST00000456659 717 ntBASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms