Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPSAP19-201ENST00000431241 880 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 PTPN2P2-201ENST00000433704 1024 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 MTND6P10-201ENST00000437240 517 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 OR7E111P-201ENST00000442229 1014 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 RN7SL394P-201ENST00000480997 291 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AC130343.2-201ENST00000615078 426 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 Z82244.2-201ENST00000632196 448 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 TARDBP-229ENST00000638264 774 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 KRT7-AS-201ENST00000546686 1693 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 IL7-201ENST00000263851 2076 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 SH2D4B-201ENST00000313455 2889 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 RCBTB2-202ENST00000430805 3179 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 TIMMDC1-208ENST00000494664 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AL031846.2-201ENST00000624656 3671 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 UPP2-204ENST00000605860 2435 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC142086.1-201ENST00000566260 1682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 C5orf66-AS2-201ENST00000505663 2162 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 CMTM2-201ENST00000268595 1054 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 IGLV4-60-201ENST00000390284 362 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 U3.41-201ENST00000408711 219 ntBASIC12.55□□□□□ -0.4
LMO3Q8TAP4 SNRNP35-202ENST00000412157 1140 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 HLA-DQB3-203ENST00000425319 356 ntBASIC12.55□□□□□ -0.4
LMO3Q8TAP4 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC124301.2-201ENST00000529781 556 ntTSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AL512631.1-201ENST00000604086 840 ntBASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AC080038.2-201ENST00000617734 423 ntBASIC12.55□□□□□ -0.4
LMO3Q8TAP4 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 ARHGAP30-202ENST00000368015 3887 ntTSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 VRK3-223ENST00000601341 1777 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 TDG-201ENST00000266775 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 FNDC9-201ENST00000312349 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 CTCFL-221ENST00000608903 2135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LMO3Q8TAP4 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC12.55□□□□□ -0.4
LMO3Q8TAP4 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 MPP4-205ENST00000409474 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC024568.1-201ENST00000517330 2260 ntBASIC12.54□□□□□ -0.4
LMO3Q8TAP4 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 SH3PXD2A-AS1-202ENST00000627886 2027 ntTSL 4 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TRIM62-201ENST00000291416 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 TMEM159-202ENST00000261388 1812 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 AC027801.2-201ENST00000515692 1816 ntTSL 5 BASIC12.54□□□□□ -0.4
LMO3Q8TAP4 SPDL1-201ENST00000265295 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms