Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MORC2-AS1-201ENST00000422995 2274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 FCRL5-203ENST00000368190 2800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 AC092279.1-202ENST00000597683 1966 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 PDE6C-201ENST00000371447 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SLC1A1P43005 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 KRTAP4-2-201ENST00000377726 763 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SLC1A1P43005 TTC32-202ENST00000402414 735 ntTSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC12.4□□□□□ -0.42
SLC1A1P43005 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC12.4□□□□□ -0.42
SLC1A1P43005 KRTAP13-5P-201ENST00000418755 499 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12.4□□□□□ -0.42
SLC1A1P43005 INO80C-203ENST00000441607 904 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 OR7E111P-201ENST00000442229 1014 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 ELMOD2-206ENST00000511887 751 ntTSL 4 BASIC12.4□□□□□ -0.42
SLC1A1P43005 LINC00290-201ENST00000512487 593 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC12.4□□□□□ -0.42
SLC1A1P43005 AF254982.1-201ENST00000611755 311 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 FP700107.1-201ENST00000615237 1178 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 AL356585.3-201ENST00000625196 1017 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 AC127526.5-201ENST00000637148 1110 ntBASIC12.4□□□□□ -0.42
SLC1A1P43005 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SLC1A1P43005 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 METTL2B-201ENST00000262432 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 C5orf66-AS2-201ENST00000505663 2162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 PDPN-211ENST00000617617 2808 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SLC1A1P43005 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC12.4□□□□□ -0.42
SLC1A1P43005 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC12.4□□□□□ -0.42
SLC1A1P43005 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SLC1A1P43005 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
SLC1A1P43005 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SLC1A1P43005 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SLC1A1P43005 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.43
SLC1A1P43005 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 NSD3-203ENST00000433384 5276 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 TUBA3GP-201ENST00000410028 1325 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 AC005906.2-210ENST00000640468 1303 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AL645504.1-201ENST00000429443 1809 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 NHP2P1-201ENST00000335274 462 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.39□□□□□ -0.43
SLC1A1P43005 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC106782.3-201ENST00000563429 258 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 DNM1P50-201ENST00000565767 508 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC005154.1-229ENST00000580440 791 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 RN7SL596P-201ENST00000582123 288 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC12.39□□□□□ -0.43
SLC1A1P43005 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC005357.2-202ENST00000590507 1060 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC12.39□□□□□ -0.43
SLC1A1P43005 PHF23-213ENST00000613632 850 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC073592.10-201ENST00000624789 597 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AC087525.1-202ENST00000559821 1988 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 AL109976.1-201ENST00000621919 5678 ntBASIC12.39□□□□□ -0.43
SLC1A1P43005 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SLC1A1P43005 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 VDR-206ENST00000549336 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SLC1A1P43005 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.39□□□□□ -0.43
SLC1A1P43005 KRBA1-203ENST00000485033 3434 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms