Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 PHACTR3-203ENST00000361300 2162 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 LINC01018-201ENST00000505626 3036 ntTSL 2 BASIC10.86□□□□□ -0.67
P04436 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P04436 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 CLDN17-201ENST00000286808 1193 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
P04436 UFC1-201ENST00000368003 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 MIR874-201ENST00000401190 78 ntBASIC10.86□□□□□ -0.67
P04436 LINC00443-201ENST00000421601 1170 ntTSL 3 BASIC10.86□□□□□ -0.67
P04436 OR7E31P-201ENST00000426212 886 ntBASIC10.86□□□□□ -0.67
P04436 RRM2P3-201ENST00000426279 1163 ntBASIC10.86□□□□□ -0.67
P04436 KRT42P-203ENST00000458343 671 ntBASIC10.86□□□□□ -0.67
P04436 RN7SL340P-201ENST00000470792 296 ntBASIC10.86□□□□□ -0.67
P04436 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
P04436 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC10.86□□□□□ -0.67
P04436 IGHV7-56-201ENST00000518372 351 ntBASIC10.86□□□□□ -0.67
P04436 AC104371.1-201ENST00000522077 797 ntBASIC10.86□□□□□ -0.67
P04436 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 AC013489.2-201ENST00000558732 276 ntBASIC10.86□□□□□ -0.67
P04436 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
P04436 RN7SL733P-201ENST00000582253 329 ntBASIC10.86□□□□□ -0.67
P04436 AL365205.3-201ENST00000593368 169 ntBASIC10.86□□□□□ -0.67
P04436 PDLIM1P1-201ENST00000604187 969 ntBASIC10.86□□□□□ -0.67
P04436 RN7SL248P-201ENST00000615117 329 ntBASIC10.86□□□□□ -0.67
P04436 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC10.86□□□□□ -0.67
P04436 AL512324.1-201ENST00000618885 217 ntBASIC10.86□□□□□ -0.67
P04436 RN7SL453P-201ENST00000620275 329 ntBASIC10.86□□□□□ -0.67
P04436 AC241644.3-202ENST00000622634 535 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P04436 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P04436 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC10.86□□□□□ -0.67
P04436 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 PSG3-201ENST00000327495 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
P04436 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10.86□□□□□ -0.67
P04436 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 LINC01304-201ENST00000425949 1475 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 BTNL2-203ENST00000454136 1460 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
P04436 ASB11-203ENST00000480796 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 CRISP2-203ENST00000618917 1492 ntTSL 5 BASIC10.86□□□□□ -0.67
P04436 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.86□□□□□ -0.67
P04436 AP000821.1-201ENST00000567082 1909 ntBASIC10.86□□□□□ -0.67
P04436 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P04436 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04436 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 C3orf35-205ENST00000426078 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 TYR-201ENST00000263321 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
P04436 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
P04436 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC10.85□□□□□ -0.67
P04436 AC145098.2-201ENST00000623593 3026 ntBASIC10.85□□□□□ -0.67
P04436 PAX6-258ENST00000639548 1417 ntTSL 5 BASIC10.85□□□□□ -0.67
P04436 AP001972.5-201ENST00000624624 2338 ntBASIC10.85□□□□□ -0.67
P04436 SLC2A12-201ENST00000275230 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 SAMMSON-221ENST00000641715 1546 ntBASIC10.85□□□□□ -0.67
P04436 AL034399.2-201ENST00000430140 2090 ntTSL 2 BASIC10.85□□□□□ -0.67
P04436 TCP1P1-201ENST00000412860 1610 ntBASIC10.85□□□□□ -0.67
P04436 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC10.85□□□□□ -0.67
P04436 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 KRBOX1-203ENST00000426937 826 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
P04436 RN7SL497P-201ENST00000476341 301 ntBASIC10.85□□□□□ -0.67
P04436 RN7SL704P-201ENST00000478699 274 ntBASIC10.85□□□□□ -0.67
P04436 RN7SL87P-201ENST00000497657 288 ntBASIC10.85□□□□□ -0.67
P04436 GPR79-201ENST00000498175 868 ntBASIC10.85□□□□□ -0.67
P04436 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 C10orf113-202ENST00000534331 579 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC10.85□□□□□ -0.67
P04436 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC10.85□□□□□ -0.67
P04436 PINLYP-203ENST00000562255 569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC10.85□□□□□ -0.67
P04436 AC137834.2-201ENST00000617433 701 ntBASIC10.85□□□□□ -0.67
P04436 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
P04436 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 AL132639.2-201ENST00000605298 1359 ntBASIC10.85□□□□□ -0.67
P04436 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 LINC00880-201ENST00000471357 2018 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04436 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms