Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC253536.1-201ENST00000437021 315 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 RARRES3-203ENST00000439013 938 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 AL365258.2-201ENST00000447479 472 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 SPATA3-208ENST00000455816 766 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 RN7SL173P-201ENST00000461853 292 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 RN7SL513P-201ENST00000465715 298 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 LINC01804-203ENST00000492352 1871 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 RN7SL110P-201ENST00000498222 283 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 SEC14L1P1-201ENST00000534767 2181 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 PSME2-213ENST00000560410 755 ntTSL 3 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 APOC1P1-202ENST00000571466 253 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 AC007923.3-201ENST00000578645 292 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 WSB1-213ENST00000583193 552 ntTSL 4 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 MIR6816-201ENST00000620368 66 ntBASIC12.58□□□□□ -0.4
LMO3Q8TAP4 LRRD1-205ENST00000458448 2830 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 GPRASP2-205ENST00000543253 3935 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 LINGO4-201ENST00000368820 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.58□□□□□ -0.4
LMO3Q8TAP4 EFCAB13-201ENST00000331493 3931 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 INO80-211ENST00000616814 4272 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 BCL6-206ENST00000450123 2003 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 KCNMB1-202ENST00000521859 1733 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AL445471.2-201ENST00000568143 2443 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 PI3-201ENST00000243924 577 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 RN7SKP193-201ENST00000364488 306 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 APOL4-204ENST00000397275 845 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 HMGA1P2-201ENST00000430198 324 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 OR7E23P-201ENST00000435600 1048 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 HLA-DPB2-206ENST00000470997 776 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC091163.2-201ENST00000519032 460 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC026904.4-201ENST00000523038 559 ntTSL 4 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC015712.1-204ENST00000558254 755 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC098965.1-201ENST00000564217 967 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 SNORD3C-201ENST00000580533 581 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 COQ6-202ENST00000394026 1608 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 MAPK10-229ENST00000513186 1618 ntTSL 4 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 PSG9-208ENST00000596730 1812 ntTSL 3 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 F7-206ENST00000541084 2873 ntTSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 DRGX-201ENST00000374139 2738 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 LINC00852-201ENST00000475197 1328 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 PCDHGC4-203ENST00000617094 2793 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 CSPG4P4Y-201ENST00000333235 3724 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 CSPG4P3Y-201ENST00000418188 3724 ntBASIC12.57□□□□□ -0.4
LMO3Q8TAP4 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LMO3Q8TAP4 AC007388.1-208ENST00000438649 1901 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AL353611.2-201ENST00000625008 2897 ntBASIC12.56□□□□□ -0.4
LMO3Q8TAP4 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 ATP6V1E2-201ENST00000306448 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 C14orf159-202ENST00000298858 642 ntTSL 5 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LMO3Q8TAP4 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms