Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ITGA11-201ENST00000315757 3955 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 KRT18P45-201ENST00000515347 1333 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AL049829.3-201ENST00000604456 1875 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC002519.1-201ENST00000570073 2792 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC139100.1-201ENST00000588950 2035 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 BCAT1-205ENST00000539282 1811 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 CSPG4P11-201ENST00000560634 4910 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 SNCA-202ENST00000345009 1096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 FEN1P1-201ENST00000401028 1145 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 NTM-IT-201ENST00000421651 373 ntTSL 3 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AL158151.2-201ENST00000434250 241 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC005730.1-201ENST00000434406 344 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC245517.1-201ENST00000444224 1262 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 HNRNPA1P73-201ENST00000446472 928 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 LSP1P3-201ENST00000449530 208 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 GAPDHP76-201ENST00000512278 976 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 MST1L-204ENST00000545160 559 ntTSL 4 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 SDHDP1-201ENST00000588055 474 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC016773.1-201ENST00000605571 802 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AL133551.1-201ENST00000610279 1222 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 FAM74A7-201ENST00000613652 727 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AL158032.2-201ENST00000616818 195 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC015912.3-201ENST00000619432 348 ntBASIC12.61□□□□□ -0.39
LMO3Q8TAP4 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 ZNF16-202ENST00000394909 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 UTP14A-202ENST00000425117 2403 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 HKDC1-201ENST00000354624 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 MAGEB1-203ENST00000397550 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 RHOXF2-201ENST00000371388 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 C3orf14-206ENST00000494481 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO3Q8TAP4 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 METTL2B-201ENST00000262432 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TUBD1-201ENST00000325752 2490 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AP000695.3-201ENST00000624669 1894 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 RN7SKP245-201ENST00000364025 320 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CD72-203ENST00000378431 849 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 IDO2-202ENST00000389060 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 THUMPD1P1-201ENST00000400014 1041 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 ARHGEF9-IT1-201ENST00000420917 394 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC062028.2-201ENST00000437876 856 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AP000522.1-201ENST00000448070 121 ntBASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AC022540.1-201ENST00000448214 965 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO3Q8TAP4 AL161672.1-201ENST00000450968 818 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms