Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TMEM239-201ENST00000361033 3892 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 NEK10-204ENST00000383771 2023 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 FAM166A-201ENST00000344774 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 WDR54-202ENST00000409791 854 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC113174.1-201ENST00000433897 105 ntBASIC12.71□□□□□ -0.37
LMO3Q8TAP4 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 IDI2-AS1-203ENST00000434470 435 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC007622.1-201ENST00000488371 535 ntBASIC12.71□□□□□ -0.37
LMO3Q8TAP4 OR10V2P-201ENST00000525296 764 ntBASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC022239.2-201ENST00000533322 594 ntTSL 4 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 MIR378I-201ENST00000582688 76 ntBASIC12.71□□□□□ -0.37
LMO3Q8TAP4 TEX26-AS1-206ENST00000586464 851 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 AC147067.2-201ENST00000608161 289 ntBASIC12.71□□□□□ -0.37
LMO3Q8TAP4 NOP16-210ENST00000619979 963 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 LINC00877-203ENST00000468646 2506 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 ELF5-202ENST00000312319 2450 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO3Q8TAP4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 LONRF2-202ENST00000409647 2363 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 AC234775.2-201ENST00000392722 1792 ntBASIC12.71□□□□□ -0.38
LMO3Q8TAP4 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC12.71□□□□□ -0.38
LMO3Q8TAP4 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AL451165.1-201ENST00000334441 328 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 MGST3-201ENST00000367883 706 ntTSL 3 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 ARF1P2-201ENST00000392493 538 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AK4P5-201ENST00000404520 634 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AL021407.3-201ENST00000407522 486 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 FRG2B-201ENST00000425520 890 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 UQCRFS1P2-201ENST00000426701 722 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 PFN1P3-201ENST00000443612 402 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 PFN1P4-201ENST00000450970 402 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC002070.1-203ENST00000509470 695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 TIMM10B-203ENST00000530751 809 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC099518.2-201ENST00000565802 704 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 MIR4309-201ENST00000582498 83 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 OR10G1P-201ENST00000612164 944 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 CU634019.5-201ENST00000623518 924 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 UBR1-212ENST00000627960 189 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AC093323.2-201ENST00000632154 976 ntBASIC12.7□□□□□ -0.38
LMO3Q8TAP4 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 STK33-202ENST00000358872 1991 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 Z94160.1-201ENST00000445088 1965 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 NRAV-201ENST00000500741 1901 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 CARD8-215ENST00000520015 1931 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 RAMP2-AS1-205ENST00000592670 3118 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms