Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 BX664725.1-201ENST00000438252 379 ntBASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 C17orf82-201ENST00000623772 1530 ntBASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 AC012354.3-201ENST00000623734 483 ntBASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
UBE2D4Q9Y2X8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
UBE2D4Q9Y2X8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBE2D4Q9Y2X8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBE2D4Q9Y2X8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.96□□□□□ -0.02
UBE2D4Q9Y2X8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBE2D4Q9Y2X8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 AL499627.2-201ENST00000606283 725 ntBASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
UBE2D4Q9Y2X8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 AL033527.3-201ENST00000566366 1196 ntBASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 AC104564.3-201ENST00000582367 638 ntBASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.93□□□□□ -0.02
UBE2D4Q9Y2X8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBE2D4Q9Y2X8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms