Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC133561.4-201ENST00000566112 224 ntBASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 MIR4767-201ENST00000582827 78 ntBASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 AL139246.5-201ENST00000606645 996 ntBASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 AC110285.6-201ENST00000617652 491 ntBASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAPPC4Q9Y296 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 LINC01960-201ENST00000563759 1884 ntBASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 AL031602.1-201ENST00000633169 911 ntBASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAPPC4Q9Y296 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 EDA-201ENST00000338901 1233 ntBASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAPPC4Q9Y296 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 BX842568.3-201ENST00000418104 571 ntBASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAPPC4Q9Y296 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 AC087742.1-201ENST00000575880 1738 ntBASIC19.68■□□□□ 0.74
TRAPPC4Q9Y296 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 SLC47A1P1-202ENST00000449666 945 ntBASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 AP005435.1-201ENST00000529293 1178 ntBASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 AC233992.3-201ENST00000607491 485 ntBASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAPPC4Q9Y296 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 AC010525.1-201ENST00000585559 441 ntBASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 CA15P2-201ENST00000611168 834 ntBASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 AL355001.2-201ENST00000620617 1191 ntBASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAPPC4Q9Y296 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms