Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 AL034346.1-201ENST00000568244 1277 ntBASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA4Q9UN74 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 AC019069.1-201ENST00000610008 1333 ntBASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 BX005040.4-201ENST00000637145 1518 ntBASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 AC079834.2-201ENST00000609776 1949 ntBASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 MIR6084-201ENST00000622012 110 ntBASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 C11orf96-202ENST00000528572 1834 ntBASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA4Q9UN74 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
PCDHA4Q9UN74 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 FAM99A-202ENST00000538190 1989 ntBASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA4Q9UN74 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.64■■□□□ 1.54
PCDHA4Q9UN74 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA4Q9UN74 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
PCDHA4Q9UN74 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA4Q9UN74 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA4Q9UN74 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 AC027612.3-201ENST00000413684 1047 ntBASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA4Q9UN74 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA4Q9UN74 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms