Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 MIR4651-201ENST00000582622 73 ntBASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 SMUG1P1-201ENST00000590640 811 ntBASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 AC011767.1-201ENST00000617410 1153 ntBASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 AL050303.2-201ENST00000619798 666 ntBASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 AL353803.4-201ENST00000565882 1934 ntBASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.53■□□□□ 0.24
NOTCH3Q9UM47 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 GUSBP6-202ENST00000438529 1198 ntBASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.52■□□□□ 0.24
NOTCH3Q9UM47 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH3Q9UM47 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.52■□□□□ 0.23
NOTCH3Q9UM47 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.52■□□□□ 0.23
NOTCH3Q9UM47 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH3Q9UM47 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH3Q9UM47 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH3Q9UM47 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 KRT87P-202ENST00000534226 1464 ntBASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH3Q9UM47 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH3Q9UM47 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 SLC29A4P1-201ENST00000398760 971 ntBASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 AC069152.1-201ENST00000438030 544 ntBASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 AC104187.1-201ENST00000607510 612 ntBASIC16.48■□□□□ 0.23
NOTCH3Q9UM47 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms