Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 UNC93B8-201ENST00000511903 705 ntBASIC20.36■□□□□ 0.85
VAPAQ9P0L0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VAPAQ9P0L0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 AC006455.2-201ENST00000429931 906 ntBASIC20.35■□□□□ 0.85
VAPAQ9P0L0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VAPAQ9P0L0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
VAPAQ9P0L0 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
VAPAQ9P0L0 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
VAPAQ9P0L0 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
VAPAQ9P0L0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.34■□□□□ 0.85
VAPAQ9P0L0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
VAPAQ9P0L0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VAPAQ9P0L0 SLC25A24-204ENST00000569674 2357 ntBASIC20.32■□□□□ 0.84
VAPAQ9P0L0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 OR7E47P-201ENST00000546390 1422 ntBASIC20.32■□□□□ 0.84
VAPAQ9P0L0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VAPAQ9P0L0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VAPAQ9P0L0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms