Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
RNF146Q9NTX7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF146Q9NTX7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF146Q9NTX7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF146Q9NTX7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF146Q9NTX7 AP001160.3-201ENST00000601484 763 ntBASIC24.64■■□□□ 1.54
RNF146Q9NTX7 UBE2DNL-204ENST00000602536 740 ntBASIC24.64■■□□□ 1.54
RNF146Q9NTX7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.64■■□□□ 1.53
RNF146Q9NTX7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF146Q9NTX7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RNF146Q9NTX7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 AL034346.1-201ENST00000568244 1277 ntBASIC24.63■■□□□ 1.53
RNF146Q9NTX7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.63■■□□□ 1.53
RNF146Q9NTX7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 AC087742.1-201ENST00000575880 1738 ntBASIC24.63■■□□□ 1.53
RNF146Q9NTX7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF146Q9NTX7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.62■■□□□ 1.53
RNF146Q9NTX7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.62■■□□□ 1.53
RNF146Q9NTX7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 MIR663A-201ENST00000385250 93 ntBASIC24.61■■□□□ 1.53
RNF146Q9NTX7 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF146Q9NTX7 AC137767.1-201ENST00000602918 1920 ntBASIC24.61■■□□□ 1.53
RNF146Q9NTX7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF146Q9NTX7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF146Q9NTX7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 AC104771.1-201ENST00000603335 964 ntBASIC24.58■■□□□ 1.53
RNF146Q9NTX7 MYCNOS-205ENST00000641950 531 ntBASIC24.58■■□□□ 1.53
RNF146Q9NTX7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.58■■□□□ 1.53
RNF146Q9NTX7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RNF146Q9NTX7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RNF146Q9NTX7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
RNF146Q9NTX7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RNF146Q9NTX7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 AP006587.3-201ENST00000525742 1516 ntBASIC24.57■■□□□ 1.52
RNF146Q9NTX7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 AC010141.2-201ENST00000452426 721 ntBASIC24.57■■□□□ 1.52
RNF146Q9NTX7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF146Q9NTX7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.56■■□□□ 1.52
RNF146Q9NTX7 DUX4L16-201ENST00000555130 1264 ntBASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms