Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SND1-IT1Q9HBX3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 AIRN-201ENST00000601203 4374 ntBASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SND1-IT1Q9HBX3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 LINC01521-201ENST00000504184 1943 ntBASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.35□□□□□ -0.11
SND1-IT1Q9HBX3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 LINC01529-204ENST00000636474 1715 ntBASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SND1-IT1Q9HBX3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SND1-IT1Q9HBX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SND1-IT1Q9HBX3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.33□□□□□ -0.11
SND1-IT1Q9HBX3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SND1-IT1Q9HBX3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SND1-IT1Q9HBX3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 AL157384.1-201ENST00000445995 2473 ntBASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 LINC01960-201ENST00000563759 1884 ntBASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms