Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 AL035685.1-201ENST00000636663 812 ntBASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR2J3Q9H1A7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 MIR3621-201ENST00000580529 85 ntBASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
POLR2J3Q9H1A7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR2J3Q9H1A7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.83■□□□□ 0.77
POLR2J3Q9H1A7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
POLR2J3Q9H1A7 AC006455.2-201ENST00000429931 906 ntBASIC19.83■□□□□ 0.77
POLR2J3Q9H1A7 OR2I1P-207ENST00000453522 948 ntBASIC19.83■□□□□ 0.77
POLR2J3Q9H1A7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 AC005229.4-201ENST00000610085 2198 ntBASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR2J3Q9H1A7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 GUSBP5-201ENST00000418136 578 ntBASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 AC099791.2-201ENST00000605725 427 ntBASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 AC087239.1-201ENST00000622671 572 ntBASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR2J3Q9H1A7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR2J3Q9H1A7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.8■□□□□ 0.76
POLR2J3Q9H1A7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms