Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ECEL1P2-201ENST00000461596 1295 ntBASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 AC060814.1-201ENST00000554326 538 ntBASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 LINC01521-201ENST00000504184 1943 ntBASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 AC087742.1-201ENST00000575880 1738 ntBASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 AC092296.2-201ENST00000589470 999 ntBASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LCE3DQ9BYE3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PKD1P1-201ENST00000458669 6805 ntBASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms