Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NICN1Q9BSH3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 Z98882.1-201ENST00000622160 2253 ntBASIC18.43■□□□□ 0.54
NICN1Q9BSH3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 KRT125P-201ENST00000546827 989 ntBASIC18.43■□□□□ 0.54
NICN1Q9BSH3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 AF106564.1-201ENST00000607058 2553 ntBASIC18.43■□□□□ 0.54
NICN1Q9BSH3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NICN1Q9BSH3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NICN1Q9BSH3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NICN1Q9BSH3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 MIR4787-201ENST00000607364 84 ntBASIC18.4■□□□□ 0.54
NICN1Q9BSH3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NICN1Q9BSH3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NICN1Q9BSH3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 AL499627.2-201ENST00000606283 725 ntBASIC18.39■□□□□ 0.53
NICN1Q9BSH3 AC010997.5-201ENST00000609182 354 ntBASIC18.39■□□□□ 0.53
NICN1Q9BSH3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.39■□□□□ 0.53
NICN1Q9BSH3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NICN1Q9BSH3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NICN1Q9BSH3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NICN1Q9BSH3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NICN1Q9BSH3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms