Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.25■□□□□ 0.83
CPPED1Q9BRF8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPPED1Q9BRF8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 AC104564.3-201ENST00000582367 638 ntBASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPPED1Q9BRF8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 AC099791.2-201ENST00000605725 427 ntBASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPPED1Q9BRF8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
CPPED1Q9BRF8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CPPED1Q9BRF8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 OR2I1P-207ENST00000453522 948 ntBASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPPED1Q9BRF8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.19■□□□□ 0.82
CPPED1Q9BRF8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms