Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A7Q99884 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A7Q99884 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC6A7Q99884 AC004448.1-201ENST00000458332 883 ntBASIC18.69■□□□□ 0.58
SLC6A7Q99884 RARRES2P6-201ENST00000567333 442 ntBASIC18.69■□□□□ 0.58
SLC6A7Q99884 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC6A7Q99884 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A7Q99884 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A7Q99884 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A7Q99884 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A7Q99884 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 AL031432.3-201ENST00000607698 485 ntBASIC18.68■□□□□ 0.58
SLC6A7Q99884 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC6A7Q99884 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A7Q99884 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A7Q99884 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 AC005703.6-201ENST00000623265 1329 ntBASIC18.67■□□□□ 0.58
SLC6A7Q99884 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A7Q99884 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A7Q99884 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A7Q99884 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A7Q99884 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 SUDS3P1-201ENST00000505831 966 ntBASIC18.66■□□□□ 0.58
SLC6A7Q99884 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A7Q99884 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A7Q99884 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 FAM99A-202ENST00000538190 1989 ntBASIC18.65■□□□□ 0.58
SLC6A7Q99884 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 EDA-201ENST00000338901 1233 ntBASIC18.65■□□□□ 0.58
SLC6A7Q99884 AL355001.2-201ENST00000620617 1191 ntBASIC18.65■□□□□ 0.58
SLC6A7Q99884 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A7Q99884 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC6A7Q99884 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC6A7Q99884 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A7Q99884 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC6A7Q99884 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A7Q99884 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC6A7Q99884 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A7Q99884 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC6A7Q99884 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A7Q99884 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A7Q99884 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A7Q99884 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A7Q99884 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms