Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF11Q99590 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF11Q99590 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF11Q99590 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF11Q99590 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF11Q99590 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.23■■■□□ 2.59
SCAF11Q99590 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.23■■■□□ 2.59
SCAF11Q99590 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SCAF11Q99590 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
SCAF11Q99590 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SCAF11Q99590 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SCAF11Q99590 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.22■■■□□ 2.59
SCAF11Q99590 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.22■■■□□ 2.59
SCAF11Q99590 RARRES2P4-201ENST00000514074 484 ntBASIC31.22■■■□□ 2.59
SCAF11Q99590 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.22■■■□□ 2.59
SCAF11Q99590 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SCAF11Q99590 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.22■■■□□ 2.59
SCAF11Q99590 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF11Q99590 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF11Q99590 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF11Q99590 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.21■■■□□ 2.59
SCAF11Q99590 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SCAF11Q99590 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCAF11Q99590 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
SCAF11Q99590 AC010141.2-201ENST00000452426 721 ntBASIC31.21■■■□□ 2.59
SCAF11Q99590 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.21■■■□□ 2.59
SCAF11Q99590 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.21■■■□□ 2.59
SCAF11Q99590 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF11Q99590 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF11Q99590 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.2■■■□□ 2.59
SCAF11Q99590 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SCAF11Q99590 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.2■■■□□ 2.59
SCAF11Q99590 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
SCAF11Q99590 AC092068.2-201ENST00000590491 1708 ntBASIC31.2■■■□□ 2.58
SCAF11Q99590 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SCAF11Q99590 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.2■■■□□ 2.58
SCAF11Q99590 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.2■■■□□ 2.58
SCAF11Q99590 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.2■■■□□ 2.58
SCAF11Q99590 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SCAF11Q99590 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
SCAF11Q99590 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF11Q99590 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF11Q99590 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF11Q99590 GCSHP5-201ENST00000443090 522 ntBASIC31.19■■■□□ 2.58
SCAF11Q99590 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.19■■■□□ 2.58
SCAF11Q99590 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF11Q99590 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF11Q99590 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF11Q99590 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.18■■■□□ 2.58
SCAF11Q99590 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF11Q99590 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF11Q99590 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.18■■■□□ 2.58
SCAF11Q99590 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.18■■■□□ 2.58
SCAF11Q99590 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC31.18■■■□□ 2.58
SCAF11Q99590 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
SCAF11Q99590 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.17■■■□□ 2.58
SCAF11Q99590 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF11Q99590 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.17■■■□□ 2.58
SCAF11Q99590 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF11Q99590 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF11Q99590 MIPEPP3-201ENST00000412105 444 ntBASIC31.17■■■□□ 2.58
SCAF11Q99590 AC013268.1-206ENST00000638368 961 ntBASIC31.17■■■□□ 2.58
SCAF11Q99590 AC112229.1-201ENST00000639295 961 ntBASIC31.17■■■□□ 2.58
SCAF11Q99590 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF11Q99590 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.17■■■□□ 2.58
SCAF11Q99590 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.16■■■□□ 2.58
SCAF11Q99590 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC31.16■■■□□ 2.58
SCAF11Q99590 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.16■■■□□ 2.58
SCAF11Q99590 ANOS2P-203ENST00000472227 1816 ntBASIC31.16■■■□□ 2.58
SCAF11Q99590 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF11Q99590 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF11Q99590 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.15■■■□□ 2.58
SCAF11Q99590 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF11Q99590 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF11Q99590 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF11Q99590 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF11Q99590 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF11Q99590 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
SCAF11Q99590 DUSP5P2-201ENST00000426873 1033 ntBASIC31.14■■■□□ 2.58
SCAF11Q99590 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC31.14■■■□□ 2.58
SCAF11Q99590 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF11Q99590 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.14■■■□□ 2.58
SCAF11Q99590 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF11Q99590 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.14■■■□□ 2.58
SCAF11Q99590 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
SCAF11Q99590 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
SCAF11Q99590 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SCAF11Q99590 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.57
SCAF11Q99590 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SCAF11Q99590 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC31.14■■■□□ 2.57
SCAF11Q99590 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.14■■■□□ 2.57
SCAF11Q99590 AC083880.1-201ENST00000608266 535 ntBASIC31.14■■■□□ 2.57
SCAF11Q99590 AC092118.2-201ENST00000613495 667 ntBASIC31.14■■■□□ 2.57
SCAF11Q99590 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.14■■■□□ 2.57
SCAF11Q99590 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.13■■■□□ 2.57
SCAF11Q99590 MKRN4P-201ENST00000444706 1521 ntBASIC31.13■■■□□ 2.57
SCAF11Q99590 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.13■■■□□ 2.57
SCAF11Q99590 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.13■■■□□ 2.57
SCAF11Q99590 KRT18P20-201ENST00000548986 1279 ntBASIC31.13■■■□□ 2.57
SCAF11Q99590 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms