Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A3Q96HJ5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A3Q96HJ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 AC073130.3-201ENST00000624389 2278 ntBASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A3Q96HJ5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 MIR638-201ENST00000385237 100 ntBASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MS4A3Q96HJ5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MS4A3Q96HJ5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 AC008267.7-201ENST00000624570 1194 ntBASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MS4A3Q96HJ5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 AC009452.1-201ENST00000640823 606 ntBASIC19.21■□□□□ 0.67
MS4A3Q96HJ5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 AL031432.3-201ENST00000607698 485 ntBASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MS4A3Q96HJ5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 EDA-201ENST00000338901 1233 ntBASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 AC133561.4-201ENST00000566112 224 ntBASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 ADAM3B-201ENST00000569937 840 ntBASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 AC010525.1-201ENST00000585559 441 ntBASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 AC005837.3-201ENST00000612163 286 ntBASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A3Q96HJ5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms