Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC47A1Q96FL8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC47A1Q96FL8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SLC47A1Q96FL8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SLC47A1Q96FL8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC47A1Q96FL8 AC009102.2-201ENST00000606772 1639 ntBASIC20.24■□□□□ 0.83
SLC47A1Q96FL8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 AF106564.1-201ENST00000607058 2553 ntBASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC47A1Q96FL8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 MIR6724-1-201ENST00000616420 92 ntBASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 MIR6724-2-201ENST00000616483 92 ntBASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 MIR6724-4-201ENST00000617390 92 ntBASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 MIR6724-3-201ENST00000622482 92 ntBASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC47A1Q96FL8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 UNC93B8-201ENST00000511903 705 ntBASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC47A1Q96FL8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC47A1Q96FL8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC47A1Q96FL8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms