Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RFT1Q96AA3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RFT1Q96AA3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFT1Q96AA3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RFT1Q96AA3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFT1Q96AA3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
RFT1Q96AA3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFT1Q96AA3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.97■□□□□ 0.63
RFT1Q96AA3 KRT125P-201ENST00000546827 989 ntBASIC18.97■□□□□ 0.63
RFT1Q96AA3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 LINC01521-201ENST00000504184 1943 ntBASIC18.97■□□□□ 0.63
RFT1Q96AA3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.97■□□□□ 0.63
RFT1Q96AA3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 LINC01529-204ENST00000636474 1715 ntBASIC18.97■□□□□ 0.63
RFT1Q96AA3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFT1Q96AA3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
RFT1Q96AA3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFT1Q96AA3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
RFT1Q96AA3 AC244015.2-201ENST00000616358 1861 ntBASIC18.95■□□□□ 0.62
RFT1Q96AA3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.95■□□□□ 0.62
RFT1Q96AA3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFT1Q96AA3 RARRES2P1-201ENST00000474487 481 ntBASIC18.95■□□□□ 0.62
RFT1Q96AA3 AC092028.1-203ENST00000608262 953 ntBASIC18.95■□□□□ 0.62
RFT1Q96AA3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.95■□□□□ 0.62
RFT1Q96AA3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFT1Q96AA3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RFT1Q96AA3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.94■□□□□ 0.62
RFT1Q96AA3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.94■□□□□ 0.62
RFT1Q96AA3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.94■□□□□ 0.62
RFT1Q96AA3 MTDHP2-201ENST00000601468 714 ntBASIC18.94■□□□□ 0.62
RFT1Q96AA3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.94■□□□□ 0.62
RFT1Q96AA3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFT1Q96AA3 AL157384.1-201ENST00000445995 2473 ntBASIC18.94■□□□□ 0.62
RFT1Q96AA3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFT1Q96AA3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 TSPY9P-201ENST00000440215 945 ntBASIC18.93■□□□□ 0.62
RFT1Q96AA3 TSPY11P-201ENST00000442607 1045 ntBASIC18.93■□□□□ 0.62
RFT1Q96AA3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 MIR4787-201ENST00000607364 84 ntBASIC18.93■□□□□ 0.62
RFT1Q96AA3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.93■□□□□ 0.62
RFT1Q96AA3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFT1Q96AA3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFT1Q96AA3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFT1Q96AA3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFT1Q96AA3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms