Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 LINC00526-201ENST00000581067 1875 ntBASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 AC009237.3-201ENST00000393279 1427 ntBASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 ESRRAP2-201ENST00000418437 1549 ntBASIC24.15■■□□□ 1.46
ATP6V0A1Q93050 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 HLA-L-209ENST00000420110 1011 ntBASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 CDCA4P2-201ENST00000441182 718 ntBASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 AC073111.5-205ENST00000641717 521 ntBASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 C9orf163-202ENST00000624034 2573 ntBASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V0A1Q93050 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 AC079140.4-201ENST00000507448 529 ntBASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 RAP2CP1-201ENST00000605103 478 ntBASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V0A1Q93050 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 BID-214ENST00000617586 542 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 C1orf229-201ENST00000623686 2258 ntBASIC24.12■■□□□ 1.45
ATP6V0A1Q93050 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 AL034346.1-201ENST00000568244 1277 ntBASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 AC005224.4-201ENST00000583262 1652 ntBASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V0A1Q93050 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 AP004607.7-201ENST00000527152 1677 ntBASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.1■■□□□ 1.45
ATP6V0A1Q93050 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.09■■□□□ 1.45
ATP6V0A1Q93050 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ATP6V0A1Q93050 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
ATP6V0A1Q93050 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ATP6V0A1Q93050 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
ATP6V0A1Q93050 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.08■■□□□ 1.45
ATP6V0A1Q93050 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms