Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.04■□□□□ 0.64
USP9XQ93008 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.04■□□□□ 0.64
USP9XQ93008 AP003097.1-201ENST00000530657 1135 ntBASIC19.04■□□□□ 0.64
USP9XQ93008 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.04■□□□□ 0.64
USP9XQ93008 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
USP9XQ93008 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.04■□□□□ 0.64
USP9XQ93008 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.04■□□□□ 0.64
USP9XQ93008 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP9XQ93008 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP9XQ93008 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.03■□□□□ 0.64
USP9XQ93008 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.03■□□□□ 0.64
USP9XQ93008 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
USP9XQ93008 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.03■□□□□ 0.64
USP9XQ93008 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.03■□□□□ 0.64
USP9XQ93008 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.03■□□□□ 0.64
USP9XQ93008 AC008694.1-202ENST00000636953 945 ntBASIC19.03■□□□□ 0.64
USP9XQ93008 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP9XQ93008 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.03■□□□□ 0.64
USP9XQ93008 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP9XQ93008 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP9XQ93008 UBE2SP1-201ENST00000450587 669 ntBASIC19.03■□□□□ 0.64
USP9XQ93008 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP9XQ93008 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.03■□□□□ 0.64
USP9XQ93008 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
USP9XQ93008 DUSP8P5-201ENST00000422884 1815 ntBASIC19.03■□□□□ 0.64
USP9XQ93008 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP9XQ93008 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
USP9XQ93008 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.02■□□□□ 0.64
USP9XQ93008 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.02■□□□□ 0.64
USP9XQ93008 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.02■□□□□ 0.64
USP9XQ93008 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.02■□□□□ 0.64
USP9XQ93008 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.02■□□□□ 0.64
USP9XQ93008 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP9XQ93008 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.02■□□□□ 0.64
USP9XQ93008 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP9XQ93008 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
USP9XQ93008 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP9XQ93008 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.02■□□□□ 0.64
USP9XQ93008 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.02■□□□□ 0.63
USP9XQ93008 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 AC010141.3-201ENST00000456659 717 ntBASIC19.01■□□□□ 0.63
USP9XQ93008 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.01■□□□□ 0.63
USP9XQ93008 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.01■□□□□ 0.63
USP9XQ93008 Z99916.2-201ENST00000604037 246 ntBASIC19.01■□□□□ 0.63
USP9XQ93008 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.01■□□□□ 0.63
USP9XQ93008 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
USP9XQ93008 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.01■□□□□ 0.63
USP9XQ93008 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.01■□□□□ 0.63
USP9XQ93008 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP9XQ93008 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
USP9XQ93008 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19■□□□□ 0.63
USP9XQ93008 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19■□□□□ 0.63
USP9XQ93008 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19■□□□□ 0.63
USP9XQ93008 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19■□□□□ 0.63
USP9XQ93008 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP9XQ93008 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19■□□□□ 0.63
USP9XQ93008 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19■□□□□ 0.63
USP9XQ93008 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USP9XQ93008 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP9XQ93008 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP9XQ93008 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP9XQ93008 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.99■□□□□ 0.63
USP9XQ93008 AC097658.1-201ENST00000475555 843 ntBASIC18.99■□□□□ 0.63
USP9XQ93008 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.99■□□□□ 0.63
USP9XQ93008 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
USP9XQ93008 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.99■□□□□ 0.63
USP9XQ93008 TERF1P5-201ENST00000477545 1207 ntBASIC18.99■□□□□ 0.63
USP9XQ93008 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.99■□□□□ 0.63
USP9XQ93008 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP9XQ93008 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
USP9XQ93008 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP9XQ93008 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.98■□□□□ 0.63
USP9XQ93008 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.98■□□□□ 0.63
USP9XQ93008 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
USP9XQ93008 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.98■□□□□ 0.63
USP9XQ93008 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.98■□□□□ 0.63
USP9XQ93008 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP9XQ93008 BX088651.1-201ENST00000540551 451 ntBASIC18.98■□□□□ 0.63
USP9XQ93008 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.98■□□□□ 0.63
USP9XQ93008 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP9XQ93008 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP9XQ93008 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP9XQ93008 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP9XQ93008 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP9XQ93008 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
USP9XQ93008 KRT18P20-201ENST00000548986 1279 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms