Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RPGRQ92834 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RPGRQ92834 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
RPGRQ92834 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 AC133552.2-202ENST00000575694 574 ntBASIC26.74■■□□□ 1.87
RPGRQ92834 MIR4651-201ENST00000582622 73 ntBASIC26.74■■□□□ 1.87
RPGRQ92834 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
RPGRQ92834 AC066615.1-201ENST00000640911 628 ntBASIC26.74■■□□□ 1.87
RPGRQ92834 AC133041.1-202ENST00000642053 222 ntBASIC26.74■■□□□ 1.87
RPGRQ92834 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPGRQ92834 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.73■■□□□ 1.87
RPGRQ92834 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.73■■□□□ 1.87
RPGRQ92834 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.73■■□□□ 1.87
RPGRQ92834 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.73■■□□□ 1.87
RPGRQ92834 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RPGRQ92834 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RPGRQ92834 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RPGRQ92834 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RPGRQ92834 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RPGRQ92834 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.73■■□□□ 1.87
RPGRQ92834 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.72■■□□□ 1.87
RPGRQ92834 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPGRQ92834 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPGRQ92834 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPGRQ92834 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RPGRQ92834 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPGRQ92834 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RPGRQ92834 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.71■■□□□ 1.87
RPGRQ92834 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.71■■□□□ 1.87
RPGRQ92834 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RPGRQ92834 AC092068.2-201ENST00000590491 1708 ntBASIC26.7■■□□□ 1.87
RPGRQ92834 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.7■■□□□ 1.87
RPGRQ92834 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RPGRQ92834 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.7■■□□□ 1.86
RPGRQ92834 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
RPGRQ92834 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.7■■□□□ 1.86
RPGRQ92834 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RPGRQ92834 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.69■■□□□ 1.86
RPGRQ92834 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.69■■□□□ 1.86
RPGRQ92834 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.69■■□□□ 1.86
RPGRQ92834 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.69■■□□□ 1.86
RPGRQ92834 FAM201B-201ENST00000458407 597 ntBASIC26.69■■□□□ 1.86
RPGRQ92834 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.69■■□□□ 1.86
RPGRQ92834 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPGRQ92834 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRQ92834 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.68■■□□□ 1.86
RPGRQ92834 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
RPGRQ92834 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RPGRQ92834 AC073210.2-201ENST00000430369 194 ntBASIC26.68■■□□□ 1.86
RPGRQ92834 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRQ92834 AC098934.4-201ENST00000564127 592 ntBASIC26.68■■□□□ 1.86
RPGRQ92834 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.68■■□□□ 1.86
RPGRQ92834 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.68■■□□□ 1.86
RPGRQ92834 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.68■■□□□ 1.86
RPGRQ92834 AC013268.1-206ENST00000638368 961 ntBASIC26.68■■□□□ 1.86
RPGRQ92834 AC112229.1-201ENST00000639295 961 ntBASIC26.68■■□□□ 1.86
RPGRQ92834 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRQ92834 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRQ92834 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPGRQ92834 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRQ92834 OR7E47P-201ENST00000546390 1422 ntBASIC26.67■■□□□ 1.86
RPGRQ92834 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRQ92834 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRQ92834 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.67■■□□□ 1.86
RPGRQ92834 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.67■■□□□ 1.86
RPGRQ92834 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPGRQ92834 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRQ92834 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.66■■□□□ 1.86
RPGRQ92834 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.66■■□□□ 1.86
RPGRQ92834 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
RPGRQ92834 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.66■■□□□ 1.86
RPGRQ92834 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRQ92834 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPGRQ92834 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.66■■□□□ 1.86
RPGRQ92834 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.66■■□□□ 1.86
RPGRQ92834 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPGRQ92834 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.65■■□□□ 1.86
RPGRQ92834 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RPGRQ92834 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RPGRQ92834 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RPGRQ92834 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms