Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 AC026271.2-201ENST00000428091 497 ntBASIC21.81■■□□□ 1.08
PTCD2Q8WV60 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PTCD2Q8WV60 TSPY26P-201ENST00000476365 1326 ntBASIC21.8■■□□□ 1.08
PTCD2Q8WV60 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD2Q8WV60 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 RARRES2P6-201ENST00000567333 442 ntBASIC21.79■■□□□ 1.08
PTCD2Q8WV60 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD2Q8WV60 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 AC010141.3-201ENST00000456659 717 ntBASIC21.78■■□□□ 1.08
PTCD2Q8WV60 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.78■■□□□ 1.08
PTCD2Q8WV60 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD2Q8WV60 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 IRS3P-201ENST00000223076 1006 ntBASIC21.77■■□□□ 1.08
PTCD2Q8WV60 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PTCD2Q8WV60 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 OR7E47P-201ENST00000546390 1422 ntBASIC21.76■■□□□ 1.07
PTCD2Q8WV60 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD2Q8WV60 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 AP005435.1-201ENST00000529293 1178 ntBASIC21.75■■□□□ 1.07
PTCD2Q8WV60 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.75■■□□□ 1.07
PTCD2Q8WV60 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 IGHV3-19-201ENST00000521488 291 ntBASIC21.74■■□□□ 1.07
PTCD2Q8WV60 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 OXCT2P1-201ENST00000447263 1535 ntBASIC21.74■■□□□ 1.07
PTCD2Q8WV60 FAM99A-202ENST00000538190 1989 ntBASIC21.74■■□□□ 1.07
PTCD2Q8WV60 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCD2Q8WV60 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms