Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 AC242852.2-201ENST00000615738 1807 ntBASIC22.6■■□□□ 1.21
RNF139Q8WU17 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF139Q8WU17 AC137767.1-201ENST00000602918 1920 ntBASIC22.6■■□□□ 1.21
RNF139Q8WU17 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF139Q8WU17 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF139Q8WU17 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF139Q8WU17 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF139Q8WU17 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF139Q8WU17 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF139Q8WU17 AC087623.3-201ENST00000607047 1098 ntBASIC22.59■■□□□ 1.21
RNF139Q8WU17 MIR5787-201ENST00000611784 55 ntBASIC22.59■■□□□ 1.21
RNF139Q8WU17 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF139Q8WU17 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF139Q8WU17 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RNF139Q8WU17 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RNF139Q8WU17 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF139Q8WU17 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF139Q8WU17 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RNF139Q8WU17 ECEL1P1-201ENST00000373592 1742 ntBASIC22.58■■□□□ 1.21
RNF139Q8WU17 LINC02228-203ENST00000641970 1355 ntBASIC22.58■■□□□ 1.21
RNF139Q8WU17 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.58■■□□□ 1.2
RNF139Q8WU17 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF139Q8WU17 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 LINC00526-201ENST00000581067 1875 ntBASIC22.57■■□□□ 1.2
RNF139Q8WU17 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
RNF139Q8WU17 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF139Q8WU17 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF139Q8WU17 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF139Q8WU17 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RNF139Q8WU17 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF139Q8WU17 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF139Q8WU17 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF139Q8WU17 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.56■■□□□ 1.2
RNF139Q8WU17 AC139530.1-201ENST00000575312 1977 ntBASIC22.56■■□□□ 1.2
RNF139Q8WU17 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RNF139Q8WU17 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF139Q8WU17 EP400NL-214ENST00000641289 2402 ntBASIC22.55■■□□□ 1.2
RNF139Q8WU17 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.54■■□□□ 1.2
RNF139Q8WU17 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF139Q8WU17 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF139Q8WU17 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF139Q8WU17 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF139Q8WU17 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF139Q8WU17 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RNF139Q8WU17 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms