Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 AC005181.1-201ENST00000604782 1256 ntBASIC18.72■□□□□ 0.59
LINC01560Q8TB33 MYCNOS-205ENST00000641950 531 ntBASIC18.72■□□□□ 0.59
LINC01560Q8TB33 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01560Q8TB33 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01560Q8TB33 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 ABHD17AP1-201ENST00000358206 933 ntBASIC18.7■□□□□ 0.58
LINC01560Q8TB33 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01560Q8TB33 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LINC01560Q8TB33 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 OR7E47P-201ENST00000546390 1422 ntBASIC18.68■□□□□ 0.58
LINC01560Q8TB33 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 TSPY6P-201ENST00000448518 926 ntBASIC18.68■□□□□ 0.58
LINC01560Q8TB33 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01560Q8TB33 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CD99P1-205ENST00000527459 561 ntBASIC18.67■□□□□ 0.58
LINC01560Q8TB33 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01560Q8TB33 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 AC142086.2-201ENST00000569753 217 ntBASIC18.66■□□□□ 0.58
LINC01560Q8TB33 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01560Q8TB33 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01560Q8TB33 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms