Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNIP1Q8TAD8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 AC010141.2-201ENST00000452426 721 ntBASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 RARRES2P4-201ENST00000514074 484 ntBASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 AC092118.2-201ENST00000613495 667 ntBASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 MKRN4P-201ENST00000444706 1521 ntBASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNIP1Q8TAD8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNIP1Q8TAD8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 CYP2T1P-201ENST00000432607 1285 ntBASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 AC093323.1-202ENST00000635031 2045 ntBASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNIP1Q8TAD8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 AC138907.5-202ENST00000569484 235 ntBASIC20.33■□□□□ 0.85
SNIP1Q8TAD8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNIP1Q8TAD8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SNIP1Q8TAD8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 OR10C1-204ENST00000622521 1039 ntBASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 AC020928.2-201ENST00000588717 2197 ntBASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNIP1Q8TAD8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 AC068338.2-201ENST00000563278 1430 ntBASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 ESRRAP1-201ENST00000400596 1257 ntBASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 AL596275.1-201ENST00000423464 877 ntBASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 AC007322.4-201ENST00000509611 723 ntBASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNIP1Q8TAD8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms