Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 AC096631.2-201ENST00000436136 790 ntBASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
CFAP61Q8NHU2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 AC092667.1-201ENST00000434301 2586 ntBASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 AC133637.1-201ENST00000624115 1537 ntBASIC21.65■■□□□ 1.06
CFAP61Q8NHU2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CFAP61Q8NHU2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 AL499627.2-201ENST00000606283 725 ntBASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP61Q8NHU2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 FBXW4P1-201ENST00000426721 2239 ntBASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP61Q8NHU2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP61Q8NHU2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 AL136162.1-201ENST00000607711 1078 ntBASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 AC139530.1-201ENST00000575312 1977 ntBASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CFAP61Q8NHU2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CFAP61Q8NHU2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CFAP61Q8NHU2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.6■■□□□ 1.05
CFAP61Q8NHU2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CFAP61Q8NHU2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms