Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 AL121603.2-201ENST00000557373 2117 ntBASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 AL451085.2-201ENST00000605085 799 ntBASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNAAF1Q8NEP3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 AC244015.2-201ENST00000616358 1861 ntBASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 TSPY9P-201ENST00000440215 945 ntBASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 TSPY11P-201ENST00000442607 1045 ntBASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 AC073130.3-201ENST00000624389 2278 ntBASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNAAF1Q8NEP3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MIR6724-1-201ENST00000616420 92 ntBASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MIR6724-2-201ENST00000616483 92 ntBASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MIR6724-4-201ENST00000617390 92 ntBASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 MIR6724-3-201ENST00000622482 92 ntBASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF1Q8NEP3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 AF106564.1-201ENST00000607058 2553 ntBASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF1Q8NEP3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF1Q8NEP3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF1Q8NEP3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.82■□□□□ 0.6
DNAAF1Q8NEP3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms