Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PNLDC1Q8NA58 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNLDC1Q8NA58 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.74■□□□□ 0.59
PNLDC1Q8NA58 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PNLDC1Q8NA58 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PNLDC1Q8NA58 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
PNLDC1Q8NA58 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PNLDC1Q8NA58 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNLDC1Q8NA58 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PNLDC1Q8NA58 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.71■□□□□ 0.58
PNLDC1Q8NA58 C17orf82-201ENST00000623772 1530 ntBASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 AC092171.4-201ENST00000609130 632 ntBASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 CA15P2-201ENST00000611168 834 ntBASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNLDC1Q8NA58 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNLDC1Q8NA58 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNLDC1Q8NA58 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PNLDC1Q8NA58 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms