Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 AC144652.1-201ENST00000609974 1624 ntBASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFCAB3Q8N7B9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFCAB3Q8N7B9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
EFCAB3Q8N7B9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 SERPINA7P1-201ENST00000443077 631 ntBASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EFCAB3Q8N7B9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 DUX4L19-201ENST00000557448 1267 ntBASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 AF213884.3-201ENST00000563833 479 ntBASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 Z99916.3-201ENST00000623422 1080 ntBASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
EFCAB3Q8N7B9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFCAB3Q8N7B9 AC010542.4-201ENST00000563151 1910 ntBASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 C17orf82-201ENST00000623772 1530 ntBASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFCAB3Q8N7B9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 MIR6821-201ENST00000617625 74 ntBASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EFCAB3Q8N7B9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms