Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
ABCA6Q8N139 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA6Q8N139 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA6Q8N139 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
ABCA6Q8N139 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.37■■■□□ 2.77
ABCA6Q8N139 EEF1DP3-203ENST00000566025 782 ntBASIC32.37■■■□□ 2.77
ABCA6Q8N139 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
ABCA6Q8N139 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ABCA6Q8N139 AL596275.1-201ENST00000423464 877 ntBASIC32.36■■■□□ 2.77
ABCA6Q8N139 TERF1P5-201ENST00000477545 1207 ntBASIC32.36■■■□□ 2.77
ABCA6Q8N139 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
ABCA6Q8N139 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC32.36■■■□□ 2.77
ABCA6Q8N139 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ABCA6Q8N139 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 RHEB-204ENST00000472642 900 ntTSL 3 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
ABCA6Q8N139 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC32.35■■■□□ 2.77
ABCA6Q8N139 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ABCA6Q8N139 CREM-210ENST00000374721 2020 ntTSL 5 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ABCA6Q8N139 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ABCA6Q8N139 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC32.34■■■□□ 2.77
ABCA6Q8N139 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
ABCA6Q8N139 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.33■■■□□ 2.77
ABCA6Q8N139 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.33■■■□□ 2.77
ABCA6Q8N139 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
ABCA6Q8N139 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.33■■■□□ 2.77
ABCA6Q8N139 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
ABCA6Q8N139 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ABCA6Q8N139 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
ABCA6Q8N139 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
ABCA6Q8N139 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.32■■■□□ 2.76
ABCA6Q8N139 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC32.32■■■□□ 2.76
ABCA6Q8N139 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
ABCA6Q8N139 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC32.32■■■□□ 2.76
ABCA6Q8N139 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
ABCA6Q8N139 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
ABCA6Q8N139 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.31■■■□□ 2.76
ABCA6Q8N139 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 BX276092.2-201ENST00000417668 665 ntBASIC32.31■■■□□ 2.76
ABCA6Q8N139 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC32.31■■■□□ 2.76
ABCA6Q8N139 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
ABCA6Q8N139 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
ABCA6Q8N139 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
ABCA6Q8N139 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
ABCA6Q8N139 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC32.3■■■□□ 2.76
ABCA6Q8N139 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
ABCA6Q8N139 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.29■■■□□ 2.76
ABCA6Q8N139 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ABCA6Q8N139 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC32.28■■■□□ 2.76
ABCA6Q8N139 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
ABCA6Q8N139 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
ABCA6Q8N139 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
ABCA6Q8N139 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.27■■■□□ 2.76
ABCA6Q8N139 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
ABCA6Q8N139 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC32.27■■■□□ 2.76
ABCA6Q8N139 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms