Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 OR7E47P-201ENST00000546390 1422 ntBASIC21.29■■□□□ 1
CPNE9Q8IYJ1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 FBXW4P1-201ENST00000426721 2239 ntBASIC21.29■■□□□ 1
CPNE9Q8IYJ1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 AP005435.1-201ENST00000529293 1178 ntBASIC21.29■■□□□ 1
CPNE9Q8IYJ1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 AC007375.3-201ENST00000600936 2314 ntBASIC21.29■■□□□ 1
CPNE9Q8IYJ1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CPNE9Q8IYJ1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 BX842568.3-201ENST00000418104 571 ntBASIC21.28■■□□□ 1
CPNE9Q8IYJ1 PBX2P1-201ENST00000493219 1291 ntBASIC21.28■■□□□ 1
CPNE9Q8IYJ1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 FAM99A-202ENST00000538190 1989 ntBASIC21.28■■□□□ 1
CPNE9Q8IYJ1 OXCT2P1-201ENST00000447263 1535 ntBASIC21.28■■□□□ 1
CPNE9Q8IYJ1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CPNE9Q8IYJ1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CPNE9Q8IYJ1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CPNE9Q8IYJ1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.27■□□□□ 0.99
CPNE9Q8IYJ1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 SLC25A24-204ENST00000569674 2357 ntBASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 AC110285.6-201ENST00000617652 491 ntBASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPNE9Q8IYJ1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 AC233992.3-201ENST00000607491 485 ntBASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE9Q8IYJ1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 AC010542.4-201ENST00000563151 1910 ntBASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 AC106739.1-201ENST00000617035 715 ntBASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE9Q8IYJ1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE9Q8IYJ1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms