Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.87■■□□□ 1.89
DDX60Q8IY21 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.87■■□□□ 1.89
DDX60Q8IY21 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DDX60Q8IY21 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
DDX60Q8IY21 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DDX60Q8IY21 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.87■■□□□ 1.89
DDX60Q8IY21 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.87■■□□□ 1.89
DDX60Q8IY21 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX60Q8IY21 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX60Q8IY21 AC138907.5-202ENST00000569484 235 ntBASIC26.86■■□□□ 1.89
DDX60Q8IY21 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX60Q8IY21 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.86■■□□□ 1.89
DDX60Q8IY21 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.86■■□□□ 1.89
DDX60Q8IY21 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX60Q8IY21 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX60Q8IY21 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX60Q8IY21 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
DDX60Q8IY21 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX60Q8IY21 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX60Q8IY21 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX60Q8IY21 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX60Q8IY21 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX60Q8IY21 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.84■■□□□ 1.89
DDX60Q8IY21 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 AC231657.2-201ENST00000624556 255 ntBASIC26.84■■□□□ 1.89
DDX60Q8IY21 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX60Q8IY21 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX60Q8IY21 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX60Q8IY21 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
DDX60Q8IY21 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
DDX60Q8IY21 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX60Q8IY21 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
DDX60Q8IY21 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.83■■□□□ 1.89
DDX60Q8IY21 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.83■■□□□ 1.89
DDX60Q8IY21 OR7E47P-201ENST00000546390 1422 ntBASIC26.83■■□□□ 1.89
DDX60Q8IY21 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
DDX60Q8IY21 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 AC098934.4-201ENST00000564127 592 ntBASIC26.82■■□□□ 1.88
DDX60Q8IY21 EEF1DP3-203ENST00000566025 782 ntBASIC26.82■■□□□ 1.88
DDX60Q8IY21 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX60Q8IY21 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX60Q8IY21 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DDX60Q8IY21 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DDX60Q8IY21 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.82■■□□□ 1.88
DDX60Q8IY21 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX60Q8IY21 ABHD17AP1-201ENST00000358206 933 ntBASIC26.81■■□□□ 1.88
DDX60Q8IY21 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.81■■□□□ 1.88
DDX60Q8IY21 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX60Q8IY21 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.8■■□□□ 1.88
DDX60Q8IY21 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.8■■□□□ 1.88
DDX60Q8IY21 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.8■■□□□ 1.88
DDX60Q8IY21 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX60Q8IY21 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX60Q8IY21 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX60Q8IY21 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.79■■□□□ 1.88
DDX60Q8IY21 AC087742.1-201ENST00000575880 1738 ntBASIC26.79■■□□□ 1.88
DDX60Q8IY21 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 KRT18P20-201ENST00000548986 1279 ntBASIC26.78■■□□□ 1.88
DDX60Q8IY21 AC142086.2-201ENST00000569753 217 ntBASIC26.78■■□□□ 1.88
DDX60Q8IY21 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 AP001160.3-201ENST00000601484 763 ntBASIC26.78■■□□□ 1.88
DDX60Q8IY21 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX60Q8IY21 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
DDX60Q8IY21 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
DDX60Q8IY21 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX60Q8IY21 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX60Q8IY21 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX60Q8IY21 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms