Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SFTPA1Q8IWL2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SFTPA1Q8IWL2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 GPX1P1-201ENST00000388829 606 ntBASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.89■■□□□ 1.09
SFTPA1Q8IWL2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 MYCNOS-205ENST00000641950 531 ntBASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 OR7E47P-201ENST00000546390 1422 ntBASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SFTPA1Q8IWL2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SFTPA1Q8IWL2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 GUSBP6-202ENST00000438529 1198 ntBASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 AC087742.1-201ENST00000575880 1738 ntBASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.86■■□□□ 1.09
SFTPA1Q8IWL2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 AC083906.2-201ENST00000511578 360 ntBASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 AC005181.1-201ENST00000604782 1256 ntBASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.85■■□□□ 1.09
SFTPA1Q8IWL2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SFTPA1Q8IWL2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SFTPA1Q8IWL2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.84■■□□□ 1.09
SFTPA1Q8IWL2 CNN2P6-201ENST00000439038 900 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms