Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 AC010536.3-201ENST00000620306 533 ntBASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
NPAS4Q8IUM7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 KRT18P6-201ENST00000555540 1265 ntBASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 AL138781.1-201ENST00000566567 1274 ntBASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPAS4Q8IUM7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 OR7E47P-201ENST00000546390 1422 ntBASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 AL034346.1-201ENST00000568244 1277 ntBASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPAS4Q8IUM7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 AF201337.1-201ENST00000520239 748 ntBASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 AC133552.2-202ENST00000575694 574 ntBASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPAS4Q8IUM7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NPAS4Q8IUM7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 TSPY20P-201ENST00000450910 630 ntBASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NPAS4Q8IUM7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 AC069152.1-201ENST00000438030 544 ntBASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 SLC7A5P1-201ENST00000568957 537 ntBASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 AC105036.2-201ENST00000569468 176 ntBASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NPAS4Q8IUM7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
NPAS4Q8IUM7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NPAS4Q8IUM7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms