Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 AC128676.1-201ENST00000454392 318 ntBASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 AC008550.1-201ENST00000511500 884 ntBASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
VPS13BQ7Z7G8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 AC133552.2-202ENST00000575694 574 ntBASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13BQ7Z7G8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 CYP2T1P-201ENST00000432607 1285 ntBASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13BQ7Z7G8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.4□□□□□ -0.27
VPS13BQ7Z7G8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AC073648.6-201ENST00000641589 218 ntBASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AC009237.3-201ENST00000393279 1427 ntBASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13BQ7Z7G8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms