Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHC4Q6S5L8 OXCT2P1-201ENST00000447263 1535 ntBASIC24.38■■□□□ 1.49
SHC4Q6S5L8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHC4Q6S5L8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHC4Q6S5L8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHC4Q6S5L8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 AC087239.1-201ENST00000622671 572 ntBASIC24.35■■□□□ 1.49
SHC4Q6S5L8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHC4Q6S5L8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 AC005229.4-201ENST00000610085 2198 ntBASIC24.34■■□□□ 1.49
SHC4Q6S5L8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHC4Q6S5L8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 AL136116.3-201ENST00000402907 1138 ntBASIC24.33■■□□□ 1.49
SHC4Q6S5L8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 Z98882.1-201ENST00000622160 2253 ntBASIC24.33■■□□□ 1.49
SHC4Q6S5L8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SHC4Q6S5L8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SHC4Q6S5L8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SHC4Q6S5L8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHC4Q6S5L8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 AP005435.1-201ENST00000529293 1178 ntBASIC24.31■■□□□ 1.48
SHC4Q6S5L8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHC4Q6S5L8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.3■■□□□ 1.48
SHC4Q6S5L8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SHC4Q6S5L8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHC4Q6S5L8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHC4Q6S5L8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.29■■□□□ 1.48
SHC4Q6S5L8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms