Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN4Q6PJG9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 AC096631.2-201ENST00000436136 790 ntBASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.31■□□□□ 0.68
LRFN4Q6PJG9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 MIR4767-201ENST00000582827 78 ntBASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRFN4Q6PJG9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 SLC47A1P1-202ENST00000449666 945 ntBASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRFN4Q6PJG9 AC135279.3-201ENST00000610945 1311 ntBASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 AC068587.7-201ENST00000641602 218 ntBASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRFN4Q6PJG9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 PBX2P1-201ENST00000493219 1291 ntBASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 C11orf96-202ENST00000528572 1834 ntBASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRFN4Q6PJG9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.27■□□□□ 0.67
LRFN4Q6PJG9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRFN4Q6PJG9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRFN4Q6PJG9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
LRFN4Q6PJG9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms